PTI_04G02910.1


Description : RNA binding activity-knot of a chromodomain; MRG domain [Interproscan].


Gene families : OG_01_0002318 (OrthoFinder) Phylogenetic Tree(s): OG0002318_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G02910.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cz16g07110.t1 No alias RNA binding activity-knot of a chromodomain; MRG domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR025995 Tudor-knot 73 105
IPR026541 MRG_dom 180 386
No external refs found!