Description : Nucleolar, Nop52 [Interproscan].
Gene families : OG_01_0003254 (OrthoFinder) Phylogenetic Tree(s): OG0003254_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_04G01930.1 | |
Cluster | HCCA: Cluster_144 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre01.g019200 | 30788766 | No description available | 0.02 | OrthoFinder | |
EOD09537 | No alias | Nucleolar, Nop52 [Interproscan]. | 0.01 | OrthoFinder | |
Sro550_g164740.1 | Contig731.g8404 | RNA processing protein 1 homolog B | 0.01 | OrthoFinder | |
TP02G06580.1 | No alias | Nucleolar, Nop52 [Interproscan]. | 0.02 | OrthoFinder | |
XM_002505441.1 | MICPUN_87731, 87731 | Nucleolar, Nop52 [Interproscan]. | 0.02 | OrthoFinder | |
lcl|BLLF01000680.1_cds_GFH14040.1_8517 | HaLaN_10013, GFH14040 | Nucleolar, Nop52 [Interproscan]. | 0.02 | OrthoFinder | |
lcl|LHPG02000026.1_cds_PRW18349.1_5786 | PRW18349 | Ribosomal RNA processing 1-like protein | 0.01 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496889.1_618 | KAA8496889 | Ribosomal RNA processing protein 1-like A | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006364 | rRNA processing | IEA | Interproscan |
CC | GO:0030688 | preribosome, small subunit precursor | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005506 | iron ion binding | IEP | Enrichment |
BP | GO:0006551 | leucine metabolic process | IEP | Enrichment |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009098 | leucine biosynthetic process | IEP | Enrichment |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0043177 | organic acid binding | IEP | Enrichment |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010301 | Nop52 | 92 | 395 |
No external refs found! |