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  5. PTI_04G01780.1

PTI_04G01780.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G01780.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cz07g13230.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Cz10g28200.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD04076 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
EOD30504 No alias PA domain; Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002499639.1 MICPUN_54017, 54017 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 654 696
No external refs found!