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  5. PTI_04G01700.1

PTI_04G01700.1


Description : Ubiquitin fusion degradation protein Ufd1-like [Interproscan].


Gene families : OG_01_0001593 (OrthoFinder) Phylogenetic Tree(s): OG0001593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_04G01700.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
EOD35646 No alias Ubiquitin fusion degradation 1 protein [Ensembl]. 0.01 OrthoFinder
Sro176_g077410.1 Contig203.g2428 Ubiquitin recognition factor in ER-associated... 0.02 OrthoFinder
Transcript_contig_82 82 Ubiquitin fusion degradation protein Ufd1-like [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000949.1_cds_GFH16122.1_10599 HaLaN_12483, GFH16122 Ubiquitin fusion degradation protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR004854 Ufd1-like 22 191
No external refs found!