Description : RNA polymerase subunit RPB4/RPC9 [Interproscan].
Gene families : OG_01_0004558 (OrthoFinder) Phylogenetic Tree(s): OG0004558_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: PTI_03G05550.1 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre13.g564550 | 30783855, RPC17 | No description available | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006352 | DNA-templated transcription, initiation | IEA | Interproscan |
CC | GO:0030880 | RNA polymerase complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Enrichment |
BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Enrichment |
BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | Enrichment |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
BP | GO:0009112 | nucleobase metabolic process | IEP | Enrichment |
BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016829 | lyase activity | IEP | Enrichment |
MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Enrichment |
BP | GO:0051604 | protein maturation | IEP | Enrichment |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005574 | RPB4/RPC9 | 8 | 147 |
No external refs found! |