PTI_03G02920.1

Description : Ribosomal protein L15e [Interproscan].

Gene families : OG_01_0002964 (OrthoFinder) Phylogenetic Tree(s): OG0002964_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_03G02920.1
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000310.75	tig00000310_g24000.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.24	OrthoFinder
Cre02.g091100	30785346, RPL15	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	OrthoFinder
Cz06g21030.t1	No alias	Ribosomal protein L15e [Interproscan].	0.3	OrthoFinder
Cz06g21040.t1	No alias	Ribosomal protein L15e [Interproscan].	0.23	OrthoFinder
Dusal.0088s00017.1	33203549	Ribosomal protein L15e [Interproscan].	0.23	OrthoFinder
OT_02G04150.1	No alias	Ribosomal protein L15e [Interproscan].	0.1	OrthoFinder
Sro827_g207900.1	Contig2896.g23095	60S ribosomal protein L15	0.53	OrthoFinder
TP01G10080.1	No alias	Ribosomal protein L15e [Interproscan].	0.31	OrthoFinder
Transcript_contig_90471	90471	Ribosomal protein L15e [Interproscan].	0.06	OrthoFinder
Vocar.0001s1207.1	32885443	Ribosomal protein L15e [Interproscan].	0.22	OrthoFinder
XM_002507599.1	MICPUN_55312, 55312	Ribosomal protein L15e [Interproscan].	0.46	OrthoFinder
XM_003056506.1	MicpuC2_31849, 31849	Ribosomal protein L15e [Interproscan].	0.06	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW60132.1_6528	PRW60132	60S ribosomal L15	0.29	OrthoFinder
lcl\|VRMN01000005.1_cds_KAA8494151.1_4015	KAA8494151	60S ribosomal protein L15	0.22	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004107	chorismate synthase activity	IEP	Enrichment
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Enrichment
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Enrichment
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Enrichment
BP	GO:0006417	regulation of translation	IEP	Enrichment
BP	GO:0006448	regulation of translational elongation	IEP	Enrichment
BP	GO:0006449	regulation of translational termination	IEP	Enrichment
BP	GO:0006801	superoxide metabolic process	IEP	Enrichment
BP	GO:0006862	nucleotide transport	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Enrichment
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Enrichment
BP	GO:0009893	positive regulation of metabolic process	IEP	Enrichment
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
BP	GO:0010628	positive regulation of gene expression	IEP	Enrichment
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Enrichment
MF	GO:0015301	anion:anion antiporter activity	IEP	Enrichment
CC	GO:0015934	large ribosomal subunit	IEP	Enrichment
BP	GO:0016053	organic acid biosynthetic process	IEP	Enrichment
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Enrichment
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Enrichment
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Enrichment
MF	GO:0043022	ribosome binding	IEP	Enrichment
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
CC	GO:0044391	ribosomal subunit	IEP	Enrichment
MF	GO:0044877	protein-containing complex binding	IEP	Enrichment
BP	GO:0045727	positive regulation of translation	IEP	Enrichment
BP	GO:0045901	positive regulation of translational elongation	IEP	Enrichment
BP	GO:0045905	positive regulation of translational termination	IEP	Enrichment
BP	GO:0048518	positive regulation of biological process	IEP	Enrichment
BP	GO:0048522	positive regulation of cellular process	IEP	Enrichment
BP	GO:0051130	positive regulation of cellular component organization	IEP	Enrichment
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Enrichment
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Enrichment
MF	GO:0140323	solute:anion antiporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000439	Ribosomal_L15e	2	191

External Links

No external refs found!

PTI_03G02920.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation