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  5. PTI_03G02160.1

PTI_03G02160.1


Description : Coatomer, gamma subunit, appendage, Ig-like subdomain; Coatomer subunit gamma, C-terminal; Clathrin/coatomer adaptor, adaptin-like, N-terminal [Interproscan].


Gene families : OG_01_0003039 (OrthoFinder) Phylogenetic Tree(s): OG0003039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_03G02160.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.20 tig00020629_g12339.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder
Cre06.g310750 30779296, COPG1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cz03g11160.t1 No alias Coatomer, gamma subunit, appendage, Ig-like subdomain;... 0.02 OrthoFinder
Dusal.0055s00019.1 33187651 Coatomer, gamma subunit, appendage, Ig-like subdomain;... 0.02 OrthoFinder
Sro26_g017600.1 Contig2432.g19931 Coatomer subunit gamma 0.04 OrthoFinder
Transcript_contig_54351 54351 Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 66 563
IPR013040 Coatomer_gsu_app_Ig-like_dom 677 821
IPR032154 Coatomer_g_Cpla 824 939
No external refs found!