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  5. PTI_02G05350.1

PTI_02G05350.1


Description : Kinetochore protein Ndc80 [Interproscan].


Gene families : OG_01_0003290 (OrthoFinder) Phylogenetic Tree(s): OG0003290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G05350.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021621.13 tig00021621_g22968.t1 Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder
Cre02.g098300 30784884 Cell cycle.mitosis and meiosis.chromosome... 0.04 OrthoFinder
Cz06g36290.t1 No alias Kinetochore protein Ndc80 [Interproscan]. 0.04 OrthoFinder
Cz13g11220.t1 No alias Kinetochore protein Ndc80 [Interproscan]. 0.04 OrthoFinder
Dusal.0192s00006.1 33198688 Kinetochore protein Ndc80 [Interproscan]. 0.01 OrthoFinder
Sro675_g185480.1 Contig1040.g10286 Kinetochore protein NDC80 homolog 0.16 OrthoFinder
TP03G09850.1 No alias Kinetochore protein Ndc80 [Interproscan]. 0.1 OrthoFinder
Transcript_contig_55846 55846 Kinetochore protein Ndc80 [Interproscan]. 0.05 OrthoFinder
Vocar.0036s0088.1 32892259 Kinetochore protein Ndc80 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01003700.1_cds_GFH27987.1_22464 HaLaN_26394, GFH27987 Hypothetical protein 0.05 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33702.1_3194 PRW33702 Kinetochore NDC80 0.07 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494404.1_2934 KAA8494404 Kinetochore protein NDC80-like 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 85 234
No external refs found!