PTI_02G04860.1

Description : RimM, N-terminal [Interproscan].

Gene families : OG_01_0003699 (OrthoFinder) Phylogenetic Tree(s): OG0003699_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_02G04860.1
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021123.32	tig00021123_g18515.t2	No description available	0.02	OrthoFinder
Cre03.g191950	30786926	No description available	0.01	OrthoFinder
Cz01g10060.t1	No alias	RimM, N-terminal [Interproscan].	0.01	OrthoFinder
XM_003059516.1	MicpuC2_7828, 7828	RimM, N-terminal; PRC-barrel domain [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	Enrichment
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Enrichment
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Enrichment
MF	GO:0004605	phosphatidate cytidylyltransferase activity	IEP	Enrichment
MF	GO:0004620	phospholipase activity	IEP	Enrichment
MF	GO:0004629	phospholipase C activity	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006473	protein acetylation	IEP	Enrichment
BP	GO:0006474	N-terminal protein amino acid acetylation	IEP	Enrichment
BP	GO:0006555	methionine metabolic process	IEP	Enrichment
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	Enrichment
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Enrichment
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	Enrichment
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	Enrichment
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
BP	GO:0010564	regulation of cell cycle process	IEP	Enrichment
BP	GO:0010639	negative regulation of organelle organization	IEP	Enrichment
BP	GO:0010948	negative regulation of cell cycle process	IEP	Enrichment
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Enrichment
MF	GO:0016298	lipase activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Enrichment
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Enrichment
BP	GO:0017196	N-terminal peptidyl-methionine acetylation	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018206	peptidyl-methionine modification	IEP	Enrichment
MF	GO:0019899	enzyme binding	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Enrichment
CC	GO:0031248	protein acetyltransferase complex	IEP	Enrichment
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Enrichment
CC	GO:0031414	N-terminal protein acetyltransferase complex	IEP	Enrichment
CC	GO:0031417	NatC complex	IEP	Enrichment
BP	GO:0031577	spindle checkpoint signaling	IEP	Enrichment
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Enrichment
BP	GO:0032048	cardiolipin metabolic process	IEP	Enrichment
BP	GO:0032049	cardiolipin biosynthetic process	IEP	Enrichment
BP	GO:0033043	regulation of organelle organization	IEP	Enrichment
BP	GO:0033044	regulation of chromosome organization	IEP	Enrichment
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Enrichment
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	Enrichment
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Enrichment
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0043543	protein acylation	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Enrichment
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Enrichment
BP	GO:0045786	negative regulation of cell cycle	IEP	Enrichment
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	Enrichment
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	Enrichment
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Enrichment
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	Enrichment
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
BP	GO:0051129	negative regulation of cellular component organization	IEP	Enrichment
BP	GO:0051726	regulation of cell cycle	IEP	Enrichment
BP	GO:0051783	regulation of nuclear division	IEP	Enrichment
BP	GO:0051784	negative regulation of nuclear division	IEP	Enrichment
BP	GO:0051983	regulation of chromosome segregation	IEP	Enrichment
BP	GO:0051985	negative regulation of chromosome segregation	IEP	Enrichment
MF	GO:0070567	cytidylyltransferase activity	IEP	Enrichment
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	Enrichment
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	Enrichment
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Enrichment
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Enrichment
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Enrichment
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	Enrichment
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Enrichment
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	Enrichment
CC	GO:1902493	acetyltransferase complex	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment
BP	GO:1905818	regulation of chromosome separation	IEP	Enrichment
BP	GO:1905819	negative regulation of chromosome separation	IEP	Enrichment
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	Enrichment
BP	GO:2001251	negative regulation of chromosome organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002676	RimM_N	131	216

External Links

No external refs found!

PTI_02G04860.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation