PTI_02G03920.1


Description : Anaphase-promoting complex subunit 4, WD40 domain; WD40 repeat [Interproscan].


Gene families : OG_01_0001314 (OrthoFinder) Phylogenetic Tree(s): OG0001314_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G03920.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_68861 68861 WD40 repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008535 respiratory chain complex IV assembly IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Enrichment
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 19 52
IPR001680 WD40_repeat 129 163
IPR024977 Apc4_WD40_dom 220 266
No external refs found!