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  5. PTI_02G02880.1

PTI_02G02880.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G02880.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
EOD28097 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro30_g019670.1 Contig3962.g30367 Type III restriction enzyme, res subunit 0.02 OrthoFinder
Sro3351_g347090.1 Contig3507.g27172 Helicase 0.03 OrthoFinder
Sro549_g164590.1 Contig1749.g15564 Helicase 0.02 OrthoFinder
Sro8_g006870.1 Contig89.g1000 Helicase 0.02 OrthoFinder
SymbC1.scaffold1960.2 1960.2 Helicase-associated [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59961.1_6211 PRW59961 DEAD DEAH box helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 358 423
IPR005114 Helicase_assoc 205 279
IPR005114 Helicase_assoc 285 351
No external refs found!