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  5. PTI_02G01480.1

PTI_02G01480.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0004449 (OrthoFinder) Phylogenetic Tree(s): OG0004449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G01480.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020603.25 tig00020603_g11758.t1 Zinc finger CCCH domain-containing protein 42... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 106
No external refs found!