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  5. PTI_02G00650.1

PTI_02G00650.1


Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_02G00650.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
EOD04043 No alias Light harvesting protein [Ensembl]. 0.07 OrthoFinder
EOD04179 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
EOD06381 No alias Light harvesting protein [Ensembl]. 0.06 OrthoFinder
EOD08888 No alias Light harvesting protein [Ensembl]. 0.06 OrthoFinder
EOD09088 No alias Light harvesting protein [Ensembl]. 0.07 OrthoFinder
EOD13767 No alias Light harvesting protein [Ensembl]. 0.07 OrthoFinder
EOD16168 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
EOD17483 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD19212 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
EOD24357 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD28786 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD29856 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD30102 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD31146 No alias Light harvesting protein [Ensembl]. 0.06 OrthoFinder
EOD32547 No alias Light harvesting protein [Ensembl]. 0.05 OrthoFinder
EOD35505 No alias Light harvesting protein [Ensembl]. 0.06 OrthoFinder
EOD38673 No alias Lught harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD41827 No alias Light harvesting protein [Ensembl]. 0.04 OrthoFinder
Sro1043_g234820.1 Contig3084.g24573 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro125_g060100.1 Contig2833.g22721 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro1292_g260030.1 Contig3668.g28344 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro1292_g260040.1 Contig3668.g28345 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro137_g064500.1 Contig3969.g30465 Fucoxanthin-chlorophyll a-c binding protein 0.2 OrthoFinder
Sro1418_g271000.1 Contig4752.g35216 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro1451_g273830.1 Contig4314.g32534 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro147_g067990.1 Contig246.g3022 Chloroplastic 0.19 OrthoFinder
Sro2004_g310410.1 Contig2826.g22657 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro2330_g323570.1 Contig817.g9103 Fucoxanthin-chlorophyll a-c binding protein 0.19 OrthoFinder
Sro238_g095650.1 Contig99.g1211 Fucoxanthin-chlorophyll a-c binding protein 0.19 OrthoFinder
Sro267_g103520.1 Contig4506.g33814 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro267_g103540.1 Contig4506.g33816 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro2721_g335500.1 Contig3512.g27204 Fucoxanthin-chlorophyll a-c binding protein 0.19 OrthoFinder
Sro31_g020150.1 Contig420.g5610 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic 0.19 OrthoFinder
Sro326_g118250.1 Contig1080.g10513 Fucoxanthin-chlorophyll a-c binding protein 0.19 OrthoFinder
Sro367_g127810.1 Contig623.g7606 Fucoxanthin-chlorophyll a-c binding protein 0.19 OrthoFinder
Sro376_g129680.1 Contig3640.g28118 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro43_g026030.1 Contig2453.g20069 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro518_g158860.1 Contig3565.g27541 Chloroplastic 0.17 OrthoFinder
Sro533_g161680.1 Contig3819.g29336 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro566_g167740.1 Contig3739.g28669 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro6_g005380.1 Contig175.g2043 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro6_g005400.1 Contig175.g2045 Fucoxanthin-chlorophyll a-c binding protein 0.16 OrthoFinder
Sro720_g192680.1 Contig2421.g19829 Fucoxanthin-chlorophyll a-c binding protein 0.19 OrthoFinder
Sro773_g200470.1 Contig1379.g12690 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
Sro7_g006410.1 Contig389.g5294 Fucoxanthin-chlorophyll a-c binding protein 0.17 OrthoFinder
Sro823_g207590.1 Contig3379.g26446 Fucoxanthin-chlorophyll a-c binding protein 0.18 OrthoFinder
SymbC1.scaffold6938.2 6938.2 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
TP01G10180.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.15 OrthoFinder
TP02G08060.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
TP03G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
TP03G01960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
TP05G02100.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
TP20G01530.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.17 OrthoFinder
TP20G01560.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.18 OrthoFinder
TP22G01060.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.16 OrthoFinder
TP22G02570.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.15 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 35 189
No external refs found!