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  5. PTI_01G11820.1

PTI_01G11820.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G11820.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01000.1 No alias Hypothetical protein 0.21 OrthoFinder
PTI_00G01600.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_00G01650.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_00G01660.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G01840.1 No alias Hypothetical protein 0.18 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G02490.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_03G00520.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_03G05880.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_03G05890.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_08G00150.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_09G01500.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_09G01550.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_09G02880.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G00020.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_13G00310.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_16G02510.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.18 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_18G02840.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_18G02850.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_18G02870.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_18G02900.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_20G00080.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_22G02670.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_24G01870.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_29G00090.1 No alias Glycoside hydrolase family 1; Reverse transcriptase,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 1306 1523
No external refs found!