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  5. PTI_01G11410.1

PTI_01G11410.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0003333 (OrthoFinder) Phylogenetic Tree(s): OG0003333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G11410.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cz16g01170.t1 No alias UVR domain; Helicase, C-terminal; DEAD/DEAH box helicase... 0.01 OrthoFinder
XM_002503959.1 MICPUN_60195, 60195 DEAD/DEAH box helicase 0.02 OrthoFinder
XM_003054896.1 MicpuC2_50146, 50146 DEAD/DEAH box helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 545 643
IPR011545 DEAD/DEAH_box_helicase_dom 207 423
No external refs found!