1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_01G10440.1

PTI_01G10440.1


Description : Potassium channel domain; EF-hand domain [Interproscan].


Gene families : OG_01_0000789 (OrthoFinder) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G10440.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
EOD25254 No alias Potassium channel domain [Interproscan]. 0.02 OrthoFinder
Sro426_g140490.1 Contig1720.g15394 Two pore potassium channel 0.04 OrthoFinder
XM_002504407.1 MICPUN_108845, 108845 Voltage-gated ion channel superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 380 400
IPR013099 K_chnl_dom 289 346
IPR013099 K_chnl_dom 125 197
No external refs found!