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  5. PTI_01G10420.1

PTI_01G10420.1


Description : NAD-dependent epimerase/dehydratase [Interproscan].


Gene families : OG_01_0001072 (OrthoFinder) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G10420.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021181.14 tig00021181_g19317.t1 RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder
Cpa|evm.model.tig00021720.14 tig00021720_g23184.t1 RNA processing.organelle machineries.ribonuclease... 0.04 OrthoFinder
Cre10.g440050 30790885 RNA processing.organelle machineries.ribonuclease... 0.06 OrthoFinder
Cz06g03210.t1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.03 OrthoFinder
Cz06g11010.t1 No alias NAD(P)-binding domain [Interproscan]. 0.03 OrthoFinder
EOD37816 No alias NAD(P)-binding domain [Interproscan]. 0.02 OrthoFinder
OT_15G00960.1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.02 OrthoFinder
Sro2140_g316190.1 Contig3280.g25801 NAD dependent epimerase/dehydratase family 0.02 OrthoFinder
TP02G04440.1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1288.1 32884505 NAD-dependent epimerase/dehydratase [Interproscan]. 0.04 OrthoFinder
Vocar.0024s0021.1 32890256 NAD-dependent epimerase/dehydratase [Interproscan]. 0.04 OrthoFinder
XM_002502669.1 MICPUN_90903, 90903 NAD-dependent epimerase/dehydratase [Interproscan]. 0.04 OrthoFinder
XM_003064247.1 MicpuC2_54145, 54145 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000502.1_cds_GFH12422.1_6899 HaLaN_08111, GFH12422 Epimerase domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000502.1_cds_GFH12425.1_6902 HaLaN_08115, GFH12425 Epimerase domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61578.1_650 PRW61578 Chloroplast stem-loop binding of 41 kDa chloroplastic 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59559.1_6547 PRW59559 Chloroplast stem-loop-binding 0.02 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491938.1_4946 KAA8491938 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 53 275
No external refs found!