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  5. PTI_01G05940.1

PTI_01G05940.1


Description : Small GTPase superfamily, ARF/SAR type [Interproscan].


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G05940.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
EOD31096 No alias ADP-ribosylation factor [Ensembl]. 0.02 OrthoFinder
Transcript_contig_57121 57121 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57470.1_8802 PRW57470 ADP-ribosylation factor 5 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
CC GO:0008290 F-actin capping protein complex IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030834 regulation of actin filament depolymerization IEP Enrichment
BP GO:0030835 negative regulation of actin filament depolymerization IEP Enrichment
BP GO:0030837 negative regulation of actin filament polymerization IEP Enrichment
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032272 negative regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051016 barbed-end actin filament capping IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051693 actin filament capping IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901879 regulation of protein depolymerization IEP Enrichment
BP GO:1901880 negative regulation of protein depolymerization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 2 173
No external refs found!