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  5. PTI_01G05240.1

PTI_01G05240.1


Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G05240.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
PTI_00G00190.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_00G01600.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
PTI_00G02170.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G02240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.14 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G04600.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G01660.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_01G08060.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_01G11800.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_03G00490.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_03G05930.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_03G05950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_05G04520.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_06G01810.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_08G00160.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_09G01530.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.09 OrthoFinder
PTI_09G01560.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_09G02860.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.16 OrthoFinder
PTI_09G02870.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_10G01700.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_12G02220.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_12G02230.1 No alias Hypothetical protein 0.15 OrthoFinder
PTI_15G00010.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_16G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.06 OrthoFinder
PTI_16G00100.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_18G02830.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_18G02840.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_18G02900.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_20G00030.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_20G00040.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_20G00050.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_20G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_20G00070.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_22G02660.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.12 OrthoFinder
PTI_24G01650.1 No alias Hypothetical protein 0.17 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_29G00070.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_33G00250.1 No alias Hypothetical protein 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1266 1474
No external refs found!