PTI_01G04160.1

Description : Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone domain [Interproscan].

Gene families : OG_01_0001485 (OrthoFinder) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_01G04160.1
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g492950	30792262, RIR1	Nucleotide metabolism.deoxynucleotide...	0.07	OrthoFinder
Cz10g19230.t1	No alias	ATP-cone domain; Ribonucleotide reductase large subunit,...	0.05	OrthoFinder
Dusal.0285s00017.1	33192879	Ribonucleotide reductase large subunit, C-terminal;...	0.08	OrthoFinder
EOD13106	No alias	Ribonucleotide reductase large subunit, C-terminal...	0.09	OrthoFinder
OT_01G00090.1	No alias	Ribonucleotide reductase large subunit, C-terminal;...	0.07	OrthoFinder
Sro399_g134840.1	Contig279.g3611	Ribonucleoside-diphosphate reductase large	0.1	OrthoFinder
SymbC1.scaffold620.14	620.14	Ribonucleotide reductase large subunit, C-terminal;...	0.02	OrthoFinder
SymbC1.scaffold956.5	956.5	Ribonucleotide reductase large subunit, C-terminal;...	0.03	OrthoFinder
SymbC1.scaffold9656.2	9656.2	Ribonucleotide reductase large subunit, C-terminal;...	0.01	OrthoFinder
TP04G01330.1	No alias	Ribonucleotide reductase large subunit, N-terminal;...	0.05	OrthoFinder
Transcript_contig_53771	53771	Ribonucleotide reductase large subunit, C-terminal;...	0.02	OrthoFinder
Vocar.0031s0085.1	32890180	ATP-cone domain; Ribonucleotide reductase large subunit,...	0.05	OrthoFinder
XM_002507347.1	MICPUN_93299, 93299	Ribonucleoside-diphosphate reductase	0.04	OrthoFinder
lcl\|BLLF01000014.1_cds_GFH05936.1_413	HaLaN_00482, GFH05936	Ribonucleoside-diphosphate reductase	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Enrichment
CC	GO:0000796	condensin complex	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006275	regulation of DNA replication	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007076	mitotic chromosome condensation	IEP	Enrichment
MF	GO:0008146	sulfotransferase activity	IEP	Enrichment
BP	GO:0008156	negative regulation of DNA replication	IEP	Enrichment
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Enrichment
BP	GO:0009892	negative regulation of metabolic process	IEP	Enrichment
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0019207	kinase regulator activity	IEP	Enrichment
MF	GO:0019887	protein kinase regulator activity	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
CC	GO:0032993	protein-DNA complex	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Enrichment
MF	GO:0043015	gamma-tubulin binding	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
CC	GO:0044815	DNA packaging complex	IEP	Enrichment
BP	GO:0045005	DNA-dependent DNA replication maintenance of fidelity	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
BP	GO:0048478	replication fork protection	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
BP	GO:0090329	regulation of DNA-dependent DNA replication	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment
BP	GO:2000104	negative regulation of DNA-dependent DNA replication	IEP	Enrichment
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005144	ATP-cone_dom	3	90
IPR000788	RNR_lg_C	218	745
IPR013509	RNR_lsu_N	144	213

External Links

No external refs found!

PTI_01G04160.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation