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  5. PTI_01G02750.1

PTI_01G02750.1


Description : ABC transporter-like; ABC-transporter extension domain [Interproscan].


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G02750.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
EOD41782 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78244 78244 ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
XM_002500097.1 MICPUN_55988, 55988 Non-transporter ABC protein 0.03 OrthoFinder
XM_003057748.1 MicpuC2_44200, 44200 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003060298.1 MicpuC2_60050, 60050 ABC transporter 0.02 OrthoFinder
lcl|BLLF01000797.1_cds_GFH15030.1_9507 HaLaN_11184, GFH15030 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 161 324
IPR003439 ABC_transporter-like_ATP-bd 482 613
IPR032781 ABC_tran_Xtn 366 434
No external refs found!