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  5. PTI_01G01810.1

PTI_01G01810.1


Description : JAB1/MPN/MOV34 metalloenzyme domain; Rpn11/EIF3F, C-terminal [Interproscan].


Gene families : OG_01_0003025 (OrthoFinder) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G01810.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.78 tig00000403_g338.t1 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder
Cre06.g278256 30779235, RPN8 Protein degradation.26S proteasome.regulatory... 0.16 OrthoFinder
Cz09g10100.t1 No alias Rpn11/EIF3F, C-terminal [Interproscan]. 0.06 OrthoFinder
OT_06G03930.1 No alias Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.07 OrthoFinder
Sro1985_g309420.1 Contig949.g9798 ATPase regulatory subunit 7 homolog B 0.28 OrthoFinder
TP06G02090.1 No alias JAB1/MPN/MOV34 metalloenzyme domain; Rpn11/EIF3F,... 0.15 OrthoFinder
Transcript_contig_55600 55600 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.04 OrthoFinder
Vocar.0012s0064.1 32894778 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.06 OrthoFinder
XM_003058212.1 MicpuC2_70833, 70833 Mov34/MPN/PAD-1 family protein 0.05 OrthoFinder
lcl|BLLF01000072.1_cds_GFH07068.1_1545 HaLaN_01818, GFH07068 MPN domain-containing protein 0.05 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59803.1_6253 PRW59803 26S proteasome non-ATPase regulatory subunit 7 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008537 proteasome activator complex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 25 132
IPR024969 Rpn11/EIF3F_C 183 294
No external refs found!