1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_00G02670.1

PTI_00G02670.1


Description : AMP-binding enzyme, C-terminal domain; Acetyl-coenzyme A synthetase, N-terminal domain; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000522 (OrthoFinder) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_00G02670.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Vocar.0001s0439.1 32885727 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 153 602
IPR025110 AMP-bd_C 611 689
IPR032387 ACAS_N 88 144
No external refs found!