1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_00G02000.1

PTI_00G02000.1


Description : PiggyBac transposable element-derived protein [Interproscan].


Gene families : OG_01_0000462 (OrthoFinder) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_00G02000.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01990.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_01G05510.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_01G05530.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_11G04020.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G00300.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G02430.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_12G03060.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.05 OrthoFinder
PTI_12G03120.1 No alias Hypothetical protein 0.02 OrthoFinder
PTI_12G03140.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_12G03170.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
PTI_14G03190.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.04 OrthoFinder
PTI_15G03040.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_15G03670.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_18G02890.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
PTI_21G00020.1 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.04 OrthoFinder
PTI_21G00030.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_24G01420.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_31G00930.1 No alias Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR029526 PGBD 226 445
No external refs found!