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  5. OT_20G00580.1

OT_20G00580.1


Description : Ribosomal protein L19 [Interproscan].


Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_20G00580.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre07.g322500 30774415, MRPL19 No description available 0.05 OrthoFinder
Cre17.g734450 30782167, PRPL19 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.21 OrthoFinder
Cz11g03120.t1 No alias Ribosomal protein L19 [Interproscan]. 0.14 OrthoFinder
Dusal.0444s00003.1 33192973 Ribosomal protein L19 [Interproscan]. 0.06 OrthoFinder
Dusal.1340s00002.1 33194069 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
EOD27449 No alias Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
Sro79_g042660.1 Contig1826.g16073 Protein L19 0.04 OrthoFinder
TPCG00110.1 No alias Ribosomal protein L19 [Interproscan]. 0.06 OrthoFinder
Transcript_contig_86755 86755 Ribosomal protein L19 [Interproscan]. 0.01 OrthoFinder
Vocar.0031s0006.1 32890157 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
XM_002504578.1 MICPUN_84692, 84692 Ribosomal protein L19 [Interproscan]. 0.18 OrthoFinder
XM_003063550.1 MicpuC2_9123, 9123 Ribosomal protein L19 [Interproscan]. 0.16 OrthoFinder
XM_003063582.1 MicpuC2_11548, 11548 Ribosomal protein L19 [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01000249.1_cds_GFH09633.1_4110 HaLaN_04811, GFH09633 50S ribosomal protein L19, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 71 180
No external refs found!