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Description : THUMP domain [Interproscan].
Gene families : OG_01_0003529 (OrthoFinder) Phylogenetic Tree(s): OG0003529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_18G01860.1 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre14.g629550 | 30776350 | No description available | 0.02 | OrthoFinder | |
| Sro378_g130300.1 | Contig2744.g22073 | THUMP domain-containing protein 1 | 0.03 | OrthoFinder | |
| Vocar.0023s0034.1 | 32883291 | THUMP domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56090.1_9946 | PRW56090 | THUMP domain-containing 1-like protein | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Enrichment |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Enrichment |
| BP | GO:0006563 | L-serine metabolic process | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Enrichment |
| CC | GO:0030880 | RNA polymerase complex | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004114 | THUMP_dom | 124 | 249 |
| No external refs found! |