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  5. OT_18G00250.1

OT_18G00250.1


Description : HELP; WD40 repeat [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_18G00250.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000367.43 tig00000367_g24481.t1 No description available 0.02 OrthoFinder
Cz01g41160.t1 No alias WD40 repeat; HELP [Interproscan]. 0.03 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.03 OrthoFinder
Dusal.0121s00019.1 33195092 PLAT/LH2 domain [Interproscan]. 0.03 OrthoFinder
Dusal.0177s00015.1 33189759 HELP [Interproscan]. 0.02 OrthoFinder
Dusal.0424s00009.1 33197344 WD40 repeat; HELP [Interproscan]. 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.01 OrthoFinder
XM_002501037.1 MICPUN_93773, 93773 HELP; WD40 repeat [Interproscan]. 0.08 OrthoFinder
XM_003058024.1 MicpuC2_57171, 57171 PLAT/LH2 domain; Pleckstrin homology domain [Interproscan]. 0.06 OrthoFinder
XM_003058808.1 MicpuC2_6133, 6133 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01000936.1_cds_GFH16045.1_10522 HaLaN_12391, GFH16045 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
InterPro domains Description Start Stop
IPR005108 HELP 121 180
IPR005108 HELP 829 894
IPR001680 WD40_repeat 717 751
IPR001680 WD40_repeat 1297 1328
IPR001680 WD40_repeat 1170 1203
IPR001680 WD40_repeat 1406 1439
IPR001680 WD40_repeat 566 592
IPR001680 WD40_repeat 911 946
IPR001680 WD40_repeat 188 223
No external refs found!