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Description : Ribosomal RNA-processing protein 15 [Interproscan].
Gene families : OG_01_0004375 (OrthoFinder) Phylogenetic Tree(s): OG0004375_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_18G00160.1 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000711.42 | tig00000711_g3405.t1 | No description available | 0.06 | OrthoFinder | |
| Cre02.g095850 | 30784821 | No description available | 0.02 | OrthoFinder | |
| Cz03g05250.t1 | No alias | Ribosomal RNA-processing protein 15 [Interproscan]. | 0.06 | OrthoFinder | |
| Dusal.0642s00007.1 | 33192721 | Ribosomal RNA-processing protein 15 [Interproscan]. | 0.02 | OrthoFinder | |
| EOD13109 | No alias | Ribosomal RNA-processing protein 15 [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_67851 | 67851 | Ribosomal RNA-processing protein 15 [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003064272.1 | MicpuC2_43396, 43396 | Ribosomal RNA-processing protein 15 [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|VRMN01000005.1_cds_KAA8494130.1_3994 | KAA8494130 | RRP15-like protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006364 | rRNA processing | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012459 | Rrp15 | 96 | 211 |
| No external refs found! |