Description : Pseudouridine synthase, RsuA/RluA [Interproscan].
Gene families : OG_01_0000212 (OrthoFinder) Phylogenetic Tree(s): OG0000212_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_17G02350.1 | |
Cluster | HCCA: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre07.g323550 | 30774725, PUS8 | RNA processing.RNA... | 0.03 | OrthoFinder | |
Dusal.0755s00004.1 | 33194805 | Pseudouridine synthase, RsuA/RluA [Interproscan]. | 0.02 | OrthoFinder | |
XM_003062563.1 | MicpuC2_70674, 70674 | Pseudouridylate synthase (RSU) | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Enrichment |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Enrichment |
MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Enrichment |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
CC | GO:0016020 | membrane | IEP | Enrichment |
BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006145 | PsdUridine_synth_RsuA/RluA | 99 | 232 |
No external refs found! |