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  5. OT_17G02340.1

OT_17G02340.1


Description : Putative 5-3 exonuclease [Interproscan].


Gene families : OG_01_0002196 (OrthoFinder) Phylogenetic Tree(s): OG0002196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_17G02340.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
XM_003064064.1 MicpuC2_66433, 66433 Putative 5-3 exonuclease [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR004859 Put_53exo 1 203
No external refs found!