OT_17G02210.1

Description : Plant specific eukaryotic initiation factor 4B [Interproscan].

Gene families : OG_01_0006466 (OrthoFinder) Phylogenetic Tree(s): OG0006466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_17G02210.1
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method	Actions
XM_002502246.1	MICPUN_100734, 100734	Plant specific eukaryotic initiation factor 4B [Interproscan].	0.02	OrthoFinder
XM_003064004.1	MicpuC2_66337, 66337	Plant specific eukaryotic initiation factor 4B [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
BP	GO:0000154	rRNA modification	IEP	Enrichment
BP	GO:0001510	RNA methylation	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
MF	GO:0008649	rRNA methyltransferase activity	IEP	Enrichment
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0031167	rRNA methylation	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
BP	GO:0070475	rRNA base methylation	IEP	Enrichment
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Enrichment
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010433	EIF-4B_pln	2	470

External Links

No external refs found!