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  5. OT_17G01290.1

OT_17G01290.1


Description : Archaeal/bacterial/fungal rhodopsins; Histidine kinase/HSP90-like ATPase; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, dimerisation/phosphoacceptor domain [Interproscan].


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_17G01290.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000140.15 tig00000140_g8470.t1 Ethylene receptor 1 OS=Cucumis melo var. cantalupensis 0.01 OrthoFinder
Cpa|evm.model.tig00000158.13 tig00000158_g10126.t1 External stimuli response.light.red/far red light.PHY... 0.02 OrthoFinder
Cpa|evm.model.tig00020710.84 tig00020710_g13337.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00020941.45 tig00020941_g16237.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
Dusal.0121s00015.1 33195087 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Dusal.0121s00016.1 33195076 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0212s00008.1 33202594 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Dusal.0319s00003.1 33201934 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Sro2226_g319830.1 Contig2376.g19526 Osmosensing histidine protein kinase SLN1 0.02 OrthoFinder
SymbC1.scaffold39.189 39.189 FecR protein; Signal transduction histidine kinase,... 0.01 OrthoFinder
Vocar.0009s0380.1 32893358 Histidine kinase/HSP90-like ATPase; Adenylyl cyclase... 0.02 OrthoFinder
Vocar.0018s0081.1 32898547 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
XM_002503097.1 MICPUN_74145, 74145 Signal transduction response regulator, receiver domain... 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60699.1_4145 PRW60699 Hybrid sensor histidine kinase response regulator 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0004517 nitric-oxide synthase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006809 nitric oxide biosynthetic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046209 nitric oxide metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
BP GO:2001057 reactive nitrogen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 474 587
IPR003661 HisK_dim/P 350 413
IPR001789 Sig_transdc_resp-reg_receiver 768 889
IPR001425 Arc/bac/fun_rhodopsins 131 328
No external refs found!