1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_16G02590.1

OT_16G02590.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0004045 (OrthoFinder) Phylogenetic Tree(s): OG0004045_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G02590.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre03.g166650 30787330 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa... 0.04 OrthoFinder
Cz01g35040.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.03 OrthoFinder
PTI_08G02850.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Sro521_g159330.2 No alias DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
XM_003063481.1 MicpuC2_63953, 63953 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.1 OrthoFinder
lcl|BLLF01003304.1_cds_GFH26971.1_21448 HaLaN_25215, GFH26971 DEAD box RNA helicase CiRH22 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 69 235
IPR001650 Helicase_C 375 475
No external refs found!