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  5. OT_16G02100.1

OT_16G02100.1


Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G02100.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cz09g14190.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_1467 1467 Hypothetical protein 0.01 OrthoFinder
XM_002506580.1 MICPUN_64626, 64626 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 159 217
IPR000408 Reg_chr_condens 54 103
IPR000408 Reg_chr_condens 107 156
No external refs found!