1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_16G01800.1

OT_16G01800.1


Description : Ribosomal protein L21e [Interproscan].


Gene families : OG_01_0003022 (OrthoFinder) Phylogenetic Tree(s): OG0003022_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G01800.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.5 tig00000640_g2759.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder
Cre06.g278135 30779568, RPL21 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cz04g01160.t1 No alias Ribosomal protein L21e [Interproscan]. 0.08 OrthoFinder
Dusal.1405s00001.1 33194454 Ribosomal protein L21e [Interproscan]. 0.08 OrthoFinder
PTI_11G01510.1 No alias Ribosomal protein L21e [Interproscan]. 0.16 OrthoFinder
Sro2397_g326060.1 Contig2368.g19493 60S ribosomal protein L21 0.18 OrthoFinder
TP07G05810.1 No alias Ribosomal protein L21e [Interproscan]. 0.18 OrthoFinder
Vocar.0002s0600.1 32890806 Ribosomal protein L21e [Interproscan]. 0.08 OrthoFinder
XM_002506309.1 MICPUN_95995, 95995 Ribosomal protein L21e [Interproscan]. 0.19 OrthoFinder
XM_003063429.1 MicpuC2_49736, 49736 Ribosomal protein L21e [Interproscan]. 0.13 OrthoFinder
lcl|BLLF01002302.1_cds_GFH23564.1_18041 HaLaN_21192, GFH23564 60S ribosomal protein L21-1 0.04 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57524.1_9173 PRW57524 60S ribosomal L21-1-like 0.12 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499114.1_8067 KAA8499114 60S ribosomal protein L21-A 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 7 105
No external refs found!