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  5. OT_15G02920.1

OT_15G02920.1


Description : High mobility group box domain [Interproscan].


Gene families : OG_01_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_15G02920.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.30 tig00000025_g7939.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000553.19 tig00000553_g2090.t1 FACT complex subunit SSRP1 OS=Vicia faba 0.01 OrthoFinder
Cpa|evm.model.tig00000663.58 tig00000663_g2990.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00001339.6 tig00001339_g8262.t1 No description available 0.02 OrthoFinder
Cre06.g261450 30780082 No description available 0.02 OrthoFinder
EOD15543 No alias Protein kinase domain; High mobility group box domain... 0.02 OrthoFinder
PTI_01G08550.1 No alias High mobility group box domain [Interproscan]. 0.01 OrthoFinder
PTI_12G02780.1 No alias High mobility group box domain [Interproscan]. 0.02 OrthoFinder
Sro302_g112170.1 Contig378.g5075 Group protein B3 0.02 OrthoFinder
Sro752_g197220.1 Contig1730.g15446 Nuclear autoantigen Sp-100 (Fragment) 0.01 OrthoFinder
XM_002502830.1 MICPUN_108452, 108452 High-mobility protein 0.02 OrthoFinder
XM_002508518.1 MICPUN_106177, 106177 Animal specific-mbd4, 5 and 6 0.02 OrthoFinder
XM_003060405.1 MicpuC2_60282, 60282 High mobility group family B protein 0.04 OrthoFinder
XM_003060945.1 MicpuC2_48116, 48116 High mobility group box domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59222.1_6870 PRW59222 High mobility group 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
CC GO:0015629 actin cytoskeleton IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042393 histone binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 24 91
IPR009071 HMG_box_dom 122 193
No external refs found!