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  5. OT_15G01840.1

OT_15G01840.1


Description : ABC-transporter extension domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_15G01840.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.51 tig00000383_g24665.t1 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020629.98 tig00020629_g12419.t1 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre01.g023787 30789637 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g478128 30775784 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz03g13130.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
EOD04357 No alias ABC transporter protein [Ensembl]. 0.02 OrthoFinder
EOD21710 No alias W2 domain; ABC transporter-like; ABC-transporter... 0.02 OrthoFinder
Sro2585_g331900.1 Contig1533.g13925 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
Sro365_g127370.1 Contig3612.g27911 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
TP13G01130.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.01 OrthoFinder
Transcript_contig_54041 54041 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Vocar.0007s0396.1 32888020 ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
Vocar.0027s0024.1 32887256 ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
XM_002503388.1 MICPUN_83355, 83355 ATP-binding cassette superfamily 0.04 OrthoFinder
XM_002505024.1 MICPUN_98118, 98118 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002505228.1 MICPUN_62615, 62615 ABC transporter 0.02 OrthoFinder
XM_003057335.1 MicpuC2_70921, 70921 Zinc finger/ABC transporter fusion protein 0.02 OrthoFinder
XM_003060298.1 MicpuC2_60050, 60050 ABC transporter 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61109.1_452 PRW61109 ATP-binding cassette 0.03 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494144.1_4008 KAA8494144 ABC transporter F family member 3 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 262 418
IPR003439 ABC_transporter-like_ATP-bd 573 703
IPR032781 ABC_tran_Xtn 459 535
No external refs found!