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  5. OT_14G01920.1

OT_14G01920.1


Description : ABC-2 type transporter [Interproscan].


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_14G01920.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.3 tig00020902_g14946.t1 ABC transporter G family member 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00021582.39 tig00021582_g22636.t1 ABC transporter G family member 22 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD41640 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
PTI_24G00260.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
Sro538_g162620.1 Contig95.g1103 Putative white-brown complex homolog protein 30 0.02 OrthoFinder
SymbC1.scaffold609.10 609.10 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45485.1_1411 PRW45485 ABC transporter G family member 22 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 274 482
No external refs found!