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  5. OT_14G01350.1

OT_14G01350.1


Description : Ribosome hibernation promoting factor/RaiA [Interproscan].


Gene families : OG_01_0002719 (OrthoFinder) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_14G01350.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cre05.g237450 30783054, PSRP1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Dusal.0231s00001.1 33188195 Ribosome hibernation promoting factor/RaiA; Sigma 54... 0.02 OrthoFinder
Sro861_g212350.1 Contig902.g9529 Hibernation promotion factor 0.02 OrthoFinder
Transcript_contig_55657 55657 Ribosome hibernation promoting factor/RaiA; Sigma 54... 0.01 OrthoFinder
XM_002505777.1 MICPUN_109404, 109404 Ribosome hibernation promoting factor/RaiA; Sigma 54... 0.04 OrthoFinder
XM_003063820.1 MicpuC2_49753, 49753 Ribosome hibernation promoting factor/RaiA; Sigma 54... 0.07 OrthoFinder
lcl|BLLF01000499.1_cds_GFH12399.1_6876 HaLaN_08078, GFH12399 30S ribosomal protein 1 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496956.1_685 KAA8496956 Ribosome hibernation promotion factor 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR003489 RHF/RaiA 54 151
No external refs found!