Description : GTP binding domain [Interproscan].
Gene families : OG_01_0002558 (OrthoFinder) Phylogenetic Tree(s): OG0002558_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_14G01210.1 | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre16.g680944 | 30777393 | GTPase LSG1-1 OS=Arabidopsis thaliana | 0.05 | OrthoFinder | |
Dusal.0022s00030.1 | 33193915 | GTP binding domain [Interproscan]. | 0.06 | OrthoFinder | |
EOD12183 | No alias | Hypothetical protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD12184 | No alias | Hypothetical protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD18378 | No alias | GTP binding domain [Interproscan]. | 0.14 | OrthoFinder | |
PTI_05G02690.1 | No alias | GTP binding domain [Interproscan]. | 0.18 | OrthoFinder | |
Vocar.0022s0160.1 | 32891761 | GTP binding domain [Interproscan]. | 0.03 | OrthoFinder | |
XM_002505771.1 | MICPUN_66874, 66874 | GTP binding domain [Interproscan]. | 0.09 | OrthoFinder | |
XM_003063814.1 | MicpuC2_22559, 22559 | GTP binding domain [Interproscan]. | 0.03 | OrthoFinder | |
lcl|BLLF01001046.1_cds_GFH16749.1_11226 | HaLaN_13234, GFH16749 | CP-type G domain-containing protein | 0.01 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW61150.1_293 | PRW61150 | Large subunit GTPase 1-like protein | 0.08 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Enrichment |
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Enrichment |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
CC | GO:0034457 | Mpp10 complex | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006073 | GTP-bd | 309 | 362 |
No external refs found! |