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  5. OT_14G01140.1

OT_14G01140.1


Description : Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal [Interproscan].


Gene families : OG_01_0001071 (OrthoFinder) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_14G01140.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000361.54 tig00000361_g24402.t1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cre10.g423650 30790265, PRPL11 Protein biosynthesis.organelle translation... 0.21 OrthoFinder
Cz06g36110.t1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.02 OrthoFinder
Cz11g03060.t1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.07 OrthoFinder
EOD25013 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.06 OrthoFinder
EOD40511 No alias 50S ribosomal protein L11 [Ensembl]. 0.06 OrthoFinder
Sro10_g007800.1 Contig1.g4 50S ribosomal protein L11 0.02 OrthoFinder
Sro51_chlor_g030320.1 Rpl11 Rpl11 0.07 OrthoFinder
TPCG00670.1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.05 OrthoFinder
Vocar.0030s0022.1 32894461 Ribosomal protein L11, C-terminal; Ribosomal protein... 0.06 OrthoFinder
XM_002505743.1 MICPUN_92304, 92304 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.21 OrthoFinder
XM_003063782.1 MicpuC2_29915, 29915 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.09 OrthoFinder
lcl|BLLF01005196.1_cds_GFH30861.1_25338 HaLaN_29790, GFH30861 50S ribosomal protein L11 0.07 OrthoFinder
lcl|BLLF01005196.1_cds_GFH30862.1_25339 HaLaN_29791, GFH30862 50S ribosomal protein L11 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33322.1_3528 PRW33322 50S ribosomal L11 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 74 137
IPR020783 Ribosomal_L11_C 142 210
No external refs found!