Description : Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605 [Interproscan].
Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_14G00410.1 | |
Cluster | HCCA: Cluster_72 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000984.27 | tig00000984_g6004.t1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00020531.53 | tig00020531_g10059.t1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00022075.25 | tig00022075_g23589.t1 | RNA processing.RNA splicing.spliceosome... | 0.03 | OrthoFinder | |
Cre07.g349100 | 30774605 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder | |
Cre08.g358563 | 30773457 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder | |
Cre24.g755347 | 30782914 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder | |
Cz01g23210.t1 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.02 | OrthoFinder | |
Cz12g28100.t1 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.02 | OrthoFinder | |
Cz14g08150.t1 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.03 | OrthoFinder | |
Dusal.0003s00057.1 | 33187539 | Helicase, C-terminal; Domain of unknown function... | 0.02 | OrthoFinder | |
Dusal.0020s00025.1 | 33193741 | Helicase-associated domain; Helicase, C-terminal; Domain... | 0.02 | OrthoFinder | |
Dusal.0244s00011.1 | 33186504 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.03 | OrthoFinder | |
EOD10970 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.01 | OrthoFinder | |
EOD31583 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.01 | OrthoFinder | |
EOD37846 | No alias | ATP-dependent RNA helicase [Ensembl]. | 0.04 | OrthoFinder | |
PTI_11G03860.1 | No alias | Helicase, C-terminal; Helicase-associated domain; Domain... | 0.02 | OrthoFinder | |
Sro1676_g290440.1 | Contig3487.g27033 | Splicing factor ATP-dependent RNA helicase | 0.02 | OrthoFinder | |
Sro4_g003320.1 | Contig3815.g29250 | Splicing factor ATP-dependent RNA helicase | 0.02 | OrthoFinder | |
Transcript_contig_55707 | 55707 | Helicase, C-terminal; S1 domain; DEAD/DEAH box helicase... | 0.02 | OrthoFinder | |
Transcript_contig_89480 | 89480 | Helicase-associated domain; Helicase, C-terminal; Domain... | 0.01 | OrthoFinder | |
Vocar.0001s0362.1 | 32885233 | Helicase, C-terminal; Domain of unknown function... | 0.05 | OrthoFinder | |
XM_002500528.1 | MICPUN_97165, 97165 | Helicase, C-terminal; Helicase-associated domain; Domain... | 0.03 | OrthoFinder | |
lcl|BLLF01001160.1_cds_GFH17514.1_11991 | HaLaN_14169, GFH17514 | Helicase-associated domain [Interproscan]. | 0.02 | OrthoFinder | |
lcl|BLLF01005212.1_cds_GFH30884.1_25361 | HaLaN_29814, GFH30884 | RNA helicase | 0.02 | OrthoFinder | |
lcl|LHPG02000005.1_cds_PRW58375.1_7631 | PRW58375 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase | 0.02 | OrthoFinder | |
lcl|LHPG02000023.1_cds_PRW20509.1_5500 | PRW20509 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 | 0.05 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497022.1_751 | KAA8497022 | ATP-dependent RNA helicase dhx8 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | Enrichment |
MF | GO:0004363 | glutathione synthase activity | IEP | Enrichment |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Enrichment |
MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Enrichment |
MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
BP | GO:0006432 | phenylalanyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006749 | glutathione metabolic process | IEP | Enrichment |
BP | GO:0006750 | glutathione biosynthetic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008767 | UDP-galactopyranose mutase activity | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
MF | GO:0015923 | mannosidase activity | IEP | Enrichment |
MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Enrichment |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | Enrichment |
BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
BP | GO:0030638 | polyketide metabolic process | IEP | Enrichment |
MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
No external refs found! |