OT_14G00370.1

Description : LSM domain, eukaryotic/archaea-type [Interproscan].

Gene families : OG_01_0004585 (OrthoFinder) Phylogenetic Tree(s): OG0004585_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_14G00370.1
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre16.g662300	30777721	RNA processing.RNA splicing.U6-associated LSm accessory...	0.03	OrthoFinder
XM_003063581.1	MicpuC2_36568, 36568	LSM domain, eukaryotic/archaea-type [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
CC	GO:0016592	mediator complex	IEP	Enrichment
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Enrichment
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001163	LSM_dom_euk/arc	15	91

External Links

No external refs found!