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  5. Cpa|evm.model.tig00000197.8

Cpa|evm.model.tig00000197.8 (tig00000197_g15688.t1)


Aliases : tig00000197_g15688.t1

Description : Histone deacetylase 6 OS=Arabidopsis thaliana


Gene families : OG_01_0000505 (OrthoFinder) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000197.8
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Sro1154_g247170.1 Contig2345.g19273 Probable histone deacetylase 1-B 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 23 233
No external refs found!