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  5. OT_13G02270.1

OT_13G02270.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002263 (OrthoFinder) Phylogenetic Tree(s): OG0002263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_13G02270.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.37 tig00000789_g4131.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cre09.g397200 30780237, CCT6 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder
Cz02g02210.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
EOD39434 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
PTI_19G00150.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Sro3907_g351830.1 Contig1097.g10637 Complex protein 1 subunit zeta 0.04 OrthoFinder
Sro791_g202900.1 Contig1638.g14756 Thermosome subunit beta (Fragment) 0.09 OrthoFinder
Transcript_contig_53955 53955 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0243.1 32897465 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
XM_002503159.1 MICPUN_94492, 94492 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_003061179.1 MicpuC2_34990, 34990 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01002792.1_cds_GFH25355.1_19832 HaLaN_23300, GFH25355 Chaperonin complex component 0.04 OrthoFinder
lcl|BLLF01002792.1_cds_GFH25356.1_19833 HaLaN_23301, GFH25356 T-complex 1 subunit zeta 0.04 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50899.1_999 PRW50899 TCP-1 cpn60 chaperonin family 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 29 527
No external refs found!