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  5. OT_13G01460.1

OT_13G01460.1


Description : CobW/HypB/UreG, nucleotide-binding domain; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal [Interproscan].


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_13G01460.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold100.4 100.4 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
SymbC1.scaffold2431.4 2431.4 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.05 OrthoFinder
Vocar.0016s0023.1 32898156 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
lcl|BLLF01000319.1_cds_GFH10484.1_4961 HaLaN_05805, GFH10484 CobW C-terminal domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003495 CobW/HypB/UreG_dom 5 198
IPR011629 Cbl_biosynth_CobW-like_C 263 362
No external refs found!