OT_13G00790.1

Description : Helicase-associated domain; Helicase, C-terminal; ATP-dependent RNA helicase HrpB, C-terminal; DEAD/DEAH box helicase domain [Interproscan].

Gene families : OG_01_0003994 (OrthoFinder) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_13G00790.1
Cluster	HCCA: Cluster_23

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATPase, acting on DNA	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004527	exonuclease activity	IEP	Enrichment
MF	GO:0004601	peroxidase activity	IEP	Enrichment
BP	GO:0006814	sodium ion transport	IEP	Enrichment
BP	GO:0006885	regulation of pH	IEP	Enrichment
BP	GO:0006979	response to oxidative stress	IEP	Enrichment
MF	GO:0008408	3'-5' exonuclease activity	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0042592	homeostatic process	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
BP	GO:0050801	ion homeostasis	IEP	Enrichment
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Enrichment
BP	GO:0055080	cation homeostasis	IEP	Enrichment
BP	GO:0065008	regulation of biological quality	IEP	Enrichment
BP	GO:0098771	inorganic ion homeostasis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	64	230
IPR007502	Helicase-assoc_dom	475	542
IPR013689	RNA_helicase_ATP-dep_HrpB_C	877	1007
IPR001650	Helicase_C	290	413

External Links

No external refs found!

OT_13G00790.1

Expression Profile

Co-expression Networks

Functional Annotation