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  5. OT_12G00780.1

OT_12G00780.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain; Ancestral coatomer element 1, Sec16/Sec31 [Interproscan].


Gene families : OG_01_0001224 (OrthoFinder) Phylogenetic Tree(s): OG0001224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_12G00780.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001154.3 tig00001154_g7268.t2 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder
Cpa|evm.model.tig00001154.4 tig00001154_g7268.t2 Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder
Cz05g15150.t1 No alias Steroid receptor RNA activator-protein/coat protein... 0.02 OrthoFinder
PTI_12G00840.1 No alias Ancestral coatomer element 1, Sec16/Sec31; WW domain;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 544 733
IPR001650 Helicase_C 944 1050
IPR011545 DEAD/DEAH_box_helicase_dom 823 903
No external refs found!