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  5. OT_11G01720.1

OT_11G01720.1


Description : Ribosomal protein L4/L1e [Interproscan].


Gene families : OG_01_0001152 (OrthoFinder) Phylogenetic Tree(s): OG0001152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_11G01720.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre11.g479500 30775927, PRPL4 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cre12.g520400 30792302, MRPL4 No description available 0.02 OrthoFinder
Cz03g02040.t1 No alias Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
OT_16G00330.1 No alias Ribosomal protein L4/L1e [Interproscan]. 0.03 OrthoFinder
PTI_07G00540.1 No alias Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
Sro279_g106690.1 Contig3140.g24908 Protein L4 0.01 OrthoFinder
Sro51_chlor_g029480.1 Rpl4 Rpl4 0.01 OrthoFinder
Vocar.0048s0048.1 32893676 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
XM_002503039.1 MICPUN_59033, 59033 Ribosomal protein L4/L1e [Interproscan]. 0.03 OrthoFinder
XM_003061053.1 MicpuC2_48008, 48008 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
XM_003061431.1 MicpuC2_20384, 20384 Ribosomal protein L4/L1e [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45732.1_1468 PRW45732 50S ribosomal L4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 113 322
No external refs found!