OT_11G00920.1


Description : MCM, AAA-lid domain; MCM OB domain; MCM domain; MCM N-terminal domain; DNA replication licensing factor Mcm2 [Interproscan].


Gene families : OG_01_0004104 (OrthoFinder) Phylogenetic Tree(s): OG0004104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_11G00920.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.77 tig00020554_g10857.t1 DNA replication licensing factor MCM2 OS=Arabidopsis thaliana 0.08 OrthoFinder
Cre07.g338000 30775258, MCM2 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.08 OrthoFinder
Cz07g17040.t1 No alias MCM, AAA-lid domain; MCM OB domain; MCM domain; MCM... 0.1 OrthoFinder
Dusal.0446s00014.1 33201123 DNA replication licensing factor Mcm2; MCM domain; MCM... 0.05 OrthoFinder
EOD41127 No alias MCM, AAA-lid domain; MCM N-terminal domain; DNA... 0.03 OrthoFinder
Sro752_g197140.1 Contig1730.g15438 Licensing factor MCM2 0.08 OrthoFinder
Transcript_contig_56292 56292 DNA replication licensing factor Mcm2; MCM domain; MCM... 0.08 OrthoFinder
Vocar.0047s0069.1 32899300 DNA replication licensing factor Mcm2; MCM OB domain;... 0.08 OrthoFinder
XM_002509035.1 MICPUN_86840, 86840 MCM domain; MCM N-terminal domain; MCM OB domain; MCM,... 0.06 OrthoFinder
XM_003061640.1 MicpuC2_41597, 41597 MCM domain; MCM, AAA-lid domain; MCM OB domain; MCM... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61611.1_228 PRW61611 DNA replication licensing factor mcm2 0.04 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494300.1_4164 KAA8494300 DNA replication licensing factor mcm2 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
CC GO:0042555 MCM complex IEA Interproscan
BP GO:1905775 negative regulation of DNA helicase activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
MF GO:0042162 telomeric DNA binding IEP Enrichment
MF GO:0043047 single-stranded telomeric DNA binding IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0098847 sequence-specific single stranded DNA binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 392 614
IPR008045 MCM2 2 110
IPR027925 MCM_N 125 209
IPR041562 MCM_lid 646 728
IPR033762 MCM_OB 223 350
No external refs found!